Tag: genes (page 1 of 3)

the gay gene

Gay

Science magazine reports on a study lending support to the existence of a gene for homosexuality. The study, led by J. Michael Bailey and Alan Sanders, was published this week at Psychological Medicine. The scientists analyzed the genomes of 409 pairs of gay brothers from 384 different families. A genome-wide linkage scan led to the identification of two potential markers, one on chromosome Xq28 (which had been reported in a previous smaller study) and another in a region of chromosome 8. Bailey, for one, was surprised to find any linkage:

Bailey says he went into the project skeptical, largely because Hamer had studied just 38 pairs of gay brothers. “I thought that Dean did a fine but small study, but if I had to bet, I would have bet against our being able to replicate it.”

Samantha Allen at The Daily Beast is unimpressed:

If you don’t see gay people celebrating this news in the streets, understand that we’ve been hearing news about a potential biological basis for homosexuality for a long time now. In 1991, neuroscientist Simon LeVay suggested that small differences in the size of certain cell clusters in the hypothalamus could influence sexual orientation in men. In 1993, geneticist Dean Hamer published a paper in Science that claimed that genetic markers on the X chromosome could influence the development of a same-sex orientation in men…

As the discipline of genetics changed, so too did the scientific approach to homosexuality. In 2012, scientists examined the possibility that variations in hormone levels in the womb could influence the expression of genes that affect sexual orientation, a line of inquiry that falls under the emerging sub-discipline of epigenetics. The popular media, once so easily convinced by LeVay that homosexuality resulted from brain size and by Hamer that homosexuality was genetic, promptly changed its tune to declare that homosexuality was now epigenetic. Hooray? If it’s hard to get excited about these studies, it’s because, at this point, biological explanations for homosexuality are like iPhones—a new one comes out every year.

Bailey and Sanders acknowledge their work has limitations. Even the strongest linkage on Xq28 wasn’t statistically significant, and genome wide association studies are better at homing in on genes for a trait than the linkage study they performed this time:

Sanders admits that the strongest linkage identified from an isolated genetic marker on Xq28 doesn’t clear the threshold for significance. But he contends that the case is bolstered by neighboring markers, which appear to be shared at higher rates between pairs of gay brothers. “The convergence of the evidence pointed towards” Xq28 and chromosome 8, he asserts.

Bailey and Sanders may soon have more data to back their claim—or refute it. They are now working on a GWA study that includes genetic data from the just-published work plus DNA samples from more than 1000 additional gay men. Based on the results published this week, “it looks promising for there being genes in both of these regions,” Bailey says, “but until somebody finds a gene, we don’t know.”

Meanwhile, the New Scientist worries about the implications of the research:

On the one hand, if sexual orientation is something people are born with, and cannot change even if they want to – akin to skin colour or handedness – this should overturn the notion that people choose to be gay and could equally well choose not to be. That knowledge would help rebut those who suggest that gayness is the result of a morally unacceptable decision, or a psychological disorder. It might also help people who struggle to understand or declare their own homosexuality.

On the other, some could try to redefine homosexuality as a biological abnormality. There is no way to change people’s sexuality, but if key genes are found, it might be possible to detect homosexuality before birth, or to “cure” people by altering those genes.

getting a caffeine fix

Coffee

People aren’t the only organisms that can’t get going without a daily cuppa. Scientists have engineered a strain of E. coli to thrive on caffeine. To engineer this characteristic in the bacteria, the scientists cloned in genetic material from Psuedomonas putida bacteria. This Psuedomonas species was already known to be able to metabolize caffeine. They also needed to clone in another gene from Janthinobacterium in order for the E. coli to completely metabolize the caffeine. After cloning the genetic material into E. coli, they saw that the bacteria’s growth rate was severely limited by the amount of caffeine in their environment and they could tell how much caffeine was present in a drink by how much of the bacteria grew. The scientists are hoping that the bacteria can be used in decaffeinating waterways near major cities, as the water around population centers usually contains lots of caffeine pollution. If you can get access, check out the paper at ACS Synthetic Biology.

the eerie genetic similarity of giant squid

Giant Squid

The giant squid is one of Nature’s most elusive animals. In fact, the first video of the animal in it’s natural habitat was only captured this January.  Now a new study of the DNA in squids from around the world shows that they are all the same species. The study appears in PNAS. It looks at the DNA from dead squid that had washed ashore around the world and compared the sequences. It turns out that they are all eerily similar. The species has very little genetic diversity. From Scientific American:

When the researchers looked closely at the mitochondrial DNA of the creatures, they noticed something remarkable. Irrespective of where they came from — be it be it California, Japan, South Africa, New Zealand or somewhere else — the squid were genetically very similar.

In fact, the diversity of Architeuthis is lower than that for any other marine animal, except one — the basking shark Cetorhinus maximus, whose current population is thought to have rebounded from a small number of individuals. At first, says Thomas Gilbert, a geneticist at the University of Copenhagen and an author of the study, “When we found that the global genetic diversity of the giant squid was this low, we figured we had made an error.” But then the team checked their numbers again and saw that they were correct.

The findings not only make it clear that all giant squid around the world are the same species, but they also hint that, like the basking shark, the animals came close to extinction at some point in the not too distant past. The results are published inProceedings of the Royal Society B.

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